CAS 1440898-61-2|Deltarasin

Introduction:Basic information about CAS 1440898-61-2|Deltarasin, including its chemical name, molecular formula, synonyms, physicochemical properties, and safety information, etc.
Common NameDeltarasin
CAS Number1440898-61-2Molecular Weight603.755
Density1.2±0.1 g/cm3Boiling Point824.3±75.0 °C at 760 mmHg
Molecular FormulaC40H37N5OMelting Point/
MSDS/Flash Point452.3±37.1 °C

Names

Name1H-​Benzimidazole, 2-​[4-​[(2S)​-​2-​(2-​phenyl-​1H-​benzimidazol-​1-​yl)​-​2-​(4-​piperidinyl)​ethoxy]​phenyl]​-​1-​(phenylmethyl)​-
SynonymMore Synonyms

Deltarasin BiologicalActivity

DescriptionDeltarasin is an inhibitor of KRAS-PDEδ interaction with Kd of 38 nM for binding to purified PDEδ.
Related CatalogSignaling Pathways >>Metabolic Enzyme/Protease >>Phosphodiesterase (PDE)Research Areas >>Cancer
Target

Kd: 38 nM (PDEδ)

In VitroIn liver cells, deltarasin inhibits the interaction of RAS with PDEδ with Kd of 41 nM. Inhibition of PDEδ-KRAS interaction by deltarasin suppresses proliferation of human pancreatic ductal adenocarcinoma cells that are dependent on oncogenic KRAS[1].
In VivoDeltarasin (10 mg/kg, i.p.) impairs dose-dependent tumor growth in nude mice bearing subcutaneous human Panc-Tu-I tumour cell xenografts[1].
Kinase AssayKd values are measured by fluorescence polarization measurements. For direct titrations, increasing amounts of PDEδ are added to a solution containing 50-100 nM labelled small molecule in 200 µL PBS buffer. For displacement titrations, increasing amounts of the small molecules in DMSO are directly added to fluorescein-labelled atorvastatin (24 nM) and His6-tagged PDEδ (40 nM) in 200 µL PBS-buffer (containing 0.05% CHAPS, 1% DMSO), keeping the concentration of fluorescein-labelled atorvastatin, PDEδ and DMSO constant. For Kd measurements using isothermal titration calorimetry, PDEδ protein (280 µM) is titrated to small molecule (30 µM) in Tris/HCl buffer (temperature 25°C). In the Tm shift assays, protein melting points are detected by circular dichroism spectroscopy in the presence of small molecules.
References

[1]. Zimmermann G, et al. Small molecule inhibition of the KRAS-PDEδ interaction impairs oncogenic KRAS signalling. Nature. 2013 May 30;497(7451):638-42.

[2]. Agalioti T, et al. Mutant KRAS promotes malignant pleural effusion formation. Nat Commun. 2017 May 16;8:15205. doi: 10.1038/ncomms15205.

Chemical & Physical Properties

Density1.2±0.1 g/cm3
Boiling Point824.3±75.0 °C at 760 mmHg
Molecular FormulaC40H37N5O
Molecular Weight603.755
Flash Point452.3±37.1 °C
Exact Mass603.299805
PSA56.90000
LogP9.79
Vapour Pressure0.0±3.0 mmHg at 25°C
Index of Refraction1.680
InChIKeyLTZKEDSUXKTTTC-KXQOOQHDSA-N
SMILESc1ccc(Cn2c(-c3ccc(OCC(C4CCNCC4)n4c(-c5ccccc5)nc5ccccc54)cc3)nc3ccccc32)cc1
Storage condition-20℃

Synonyms

1H-Benzimidazole, 2-phenyl-1-[(1S)-2-[4-[1-(phenylmethyl)-1H-benzimidazol-2-yl]phenoxy]-1-(4-piperidinyl)ethyl]-
1-Benzyl-2-{4-[(2S)-2-(2-phenyl-1H-benzimidazol-1-yl)-2-(4-piperidinyl)ethoxy]phenyl}-1H-benzimidazole
Deltarasin
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